ONLINE ANALYSIS TOOLS

Time 2020-09-29 13:07:29

Web Name: ONLINE ANALYSIS TOOLS

WebSite: http://molbiol-tools.ca

ID:64015

Keywords:

ONLINE,ANALYSIS,TOOLS,

Description:

Analysis of nucleotide and protein sequence data was initially restricted to those with access to complicated mainframe or expensive desktop computer programs (for example PC/GENE, Lasergene, MacVector, Accelrys etc.). The availability of online tools permits even the novice molecular biologist the opportunity to derive a considerable amount of useful nformation from nucleotide or protein sequence data. For those with no experience I have provided three sequences: (a) a DNA sequence, (b) a protein sequence, and (c) four protein sequences presented in FASTA format. Prior to trying out a Web Site select the sequence and copy to clipboard. Each of the items in blue text is hyperlinked to a site on the Web. Each of these Web Sites has a box into which you can Paste your sequence. Click on the button labeled Search, Run or Submit. If in doubt use the default setting that the sites provide, but for the more adventuresome some of the sites offer the chance of modifying the search strategy. ONLINE RESOURCES (tutorials and glossaries) - Needs work TERTIARY STRUCTURE PREDICTIONS OF SACCHARIDES ALIGNMENTS CONVERT SEQUENCE (upper to low case, complement, reverse, RNA to DNA) COMPOSITION DNA MOTIFS HOMOLOGY SEARCHES MELTING TEMPERATURE (Tm) PCR PRIMER DESIGN PHYLOGENY PROMOTERS REPEATS SECONDARY STRUCTURE RESTRICTION ENDONUCLEASE SITES TRANSLATION (GENERAL) TRANSLATION (EUKARYOTIC GENES) (identification of introns and exons) TRANSCRIPTION FACTORS TOOLS FOR WHOLE GENOME ANALYSISTOOLS FOR METABOLOMIC RESEARCH ALIGNMENTS COMPOSITION CHEMISTRY HOMOLOGY SEARCHES MOTIFS PHYLOGENY QUATERNARY STRUCTURE PREDICTIONS SECONDARY STRUCTURE PREDICTIONS TERTIARY STRUCTURE PREDICTIONS RNA ANALYSIS PROMOTERS TERMINATORS TRANSCRIPTION FACTORS TOOLS FOR TRANSCRIPTOME RESEARCH BUFFERS CENTRIFUGATION CALCULATIONS GENERAL MOLECULAR BIOLOGY CALCULATIONS META SITES FOR DNA PROTEIN ANALYSIS SEQUENCE CLEANUP CONVERSION ONLINE GRAPHICS WINDOWS- JAVA or PERL-BASED PROGRAMS - free molecular biology programsDOWNLOADING SEQUENCES FROM GENBANK MANIPULATING THEM IN BIOEDITThe Bio-Web: Resources for Molecular and Cell Biologists is a non-commercial, educational site with the only purpose of facilitating access to biology-related information over the internet.CREATED BY: Dr. Andrew M. Kropinski, Departments of Food Science; and, Pathobiology University of Guelph, Guelph, Ontario, N1G 2W1 CANADA Problems and suggestions: Contact -Andrew M. Kropinski (Email: Phage.Canada (at) gmail.com)

TAGS:ONLINE ANALYSIS TOOLS 

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