Portal | CIPRES
Time 2021-11-22 11:24:21Web Name: Portal | CIPRES
WebSite: http://www.phylo.org
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keywords: description: CIPRES Home About Help Links News HomeAll submissions are working normally.
Tools Requirements Limitations Architecture Known Issues Usage Statistics User Locations Survey Results Publications The CIPRES Science Gateway V. 3.3Please Note: CIPRES is now using a subscription model for Non-US users.
The CIPRES Science Gateway V. 3.3 is a public resource for inference of large phylogenetic trees. It is designed to provide all researchers with access to NSF XSEDEs large computational resources through a simple browser interface. You can also access these same capabilities programatically with the CIPRES REST API. Geneious Prime USERS! Plugin for running MrBayes, RAxML, and IQTree on CIPRES available. raxmlGUI users, you can run raxmlGUI jobs using CIPRES!
High Performance Parallel Codes for Large Tree Inference and Sequence Alignment on XSEDE:
RAxML; RAxML-NG; MrBayes; BEAST; BEAST2; GARLI; MAFFT;EPA-ng; ExaBayes; DPPDIV; GPhoCS; FastTree, jModelTest2, ModelTest-NG, PAUP, ParallelStructure, PartitionFinder2, Ima3, IQ Tree, Bali-Phy, Migrate-N, Astral, and PhyloBayes.
Serial Codes for Tree Inference:
PAUP* (Inference by Parsimony); Poy(Alignment and Inference);
Serial Codes forSequence Alignment:
ClustalW; Contralign; MUSCLE; PROBCONS; PROBALIGN
Join the CIPRES Google Group for questions and problems.
News ASTRAL for estimating species trees now available in CIPRES
October 11, 2021 - 11:27 am Globus File Transfer is now available in CIPRES
June 23, 2021 - 3:40 pm Locations of last 1000 users
CIPRES Cyberinfrastructure for Phylogenetic Research
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