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Time 2020-09-25 23:06:27Web Name: Home | PeanutBase
WebSite: http://www.peanutbase.org
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PeanutBase is a member of the Legume Federation and is partnered with the Legume Information System The peanut genome has been sequenced and analyzed as part of the International Peanut Genome Initiative, in order to accelerate breeding progress and get more productive, disease-resistant, stress-tolerant varieties to farmers. The two diploid progenitors have been sequenced and are available, along with predicted genes and descriptions. The genomes of the diploid progenitors have been used to help identify and assemble the similar chromosomes in cultivated peanut. Cultivated peanut, Arachis hypogaea, is an allotetraploid (2n=4x=40) that contains two complete genomes, labeled the A and B genomes. A. duranensis (2n=2x=20) has likely contributed the A genome, and A. ipaensis has likely contributed the B genome. It may be helpful to remember these two associations by using the mnemonic: "A" comes before "B" and "duranensis" comes before "ipaensis".For cultivated peanut, Arachis hypogaea cv. Tifrunner:assemblyFor the diploid progenitor Arachis duranensis:assembly; annotation For the diploid progenitor Arachis ipaensis:assembly; annotation More about Arachis ... (Download a short review on 'Arachis duranensis, Arachis ipaensis, and the Origins of Cultivated Peanut')Let us know if you have questions, requests, or data to contribute.Cite PeanutBase and the peanut genomesCite PeanutBase:Sudhansu Dash, Ethalinda K.S. Cannon, Scott R. Kalberer, Andrew D. Farmer and Steven B. Cannon. PeanutBase and Other Bioinformatic Resources for Peanut (Chapter 8). In Peanuts Genetics, Processing, and Utilization, edited by H. Thomas Stalker and Richard F. Wilson, AOCS Press, 2016, Pages 241-252. (ISBN 9781630670382, doi:10.1016/B978-1-63067-038-2.00008-3).Cite peanut genome:David J. Bertioli, Jerry Jenkins, Josh Clevenger, Olga Dudchenko, Dongying Gao, Guillermo Seijo, Soraya C. M. Leal-Bertioli, Longhui Ren, Andrew D. Farmer, Manish K. Pandey, Sergio S. Samoluk, Brian Abernathy, Gaurav Agarwal, Carolina Ballén-Taborda, Connor Cameron, Jacqueline Campbell, Carolina Chavarro, Annapurna Chitikineni, Ye Chu, Sudhansu Dash, Moaine El Baidouri, Baozhu Guo, Wei Huang, Kyung Do Kim, Walid Korani, Sophie Lanciano, Christopher G. Lui, Marie Mirouze, Márcio C. Moretzsohn, Melanie Pham, Jin Hee Shin, Kenta Shirasawa, Senjuti Sinharoy, Avinash Sreedasyam, Nathan T. Weeks, Xinyou Zhang, Zheng Zheng, Ziqi Sun, Lutz Froenicke, Erez L. Aiden, Richard Michelmore, Rajeev K. Varshney, C. Corley Holbrook, Ethalinda K. S. Cannon, Brian E. Scheffler, Jane Grimwood, Peggy Ozias-Akins, Steven B. Cannon, Scott A. Jackson & Jeremy Schmutz. The genome sequence of segmental allotetraploid peanut Arachis hypogaea. Nature Genetics 51, 877–884 (2019).Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, Abernathy B, Chu Y, Niederhuth CE, Umale P, Araújo AC, Kozik A, Do Kim K, Burow MD, Varshney RK, Wang X, Zhang X, Barkley N, Guimarães PM, Isobe S, Guo B, Liao B, Stalker HT, Schmitz RJ, Scheffler BE, Leal-Bertioli SC, Xun X, Jackson SA, Michelmore R, Ozias-Akins P. The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nature Genetics 48:438–446 (2016). doi: 10.1038/ng.3517. PubMed PMID: 26901068.(Cited by)(Nature article metrics)This resource is being developed for U.S. and international peanut researchers and breeders, with support from The Peanut Foundation.TAGS:Home PeanutBase
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